Fungal Evolutionary Genetics
Previous Lab Members
MSc. Zerrin Kozma
zerrinkozma@naver.com /zerrin.kozma@gmail.com
Canakkale Onsekiz Mart University, Graduate School of Natural and Applied Sciences, MSc Program in Biomolecular Sciences, Canakkale/ Turkey
Education
Ph.D. in Seoul National University, in Korea 2020- Agricultural Biotechnology
Seoul National University, in Korea 2020- Korean Language Course
Hankuk University of Foreign Studies, in Korea 2020.02 – Korean Language Course
Ph.D. in Turkey, 2018 – Biruni University – Medical Genetics (Leave the University)
Master of Science (MSc), in Turkey, August 2018 – Çanakkale Onsekiz Mart University (100% English)
Bachelor's Degree (BSc), in Cyprus, February 2016 – European University of Lefke (100% English)
Associate Degree, in Turkey, March 2012 – Kocaeli University
Publications
-Hilal OZKILINC, Zerrin KOZMA, Burcu PEKDEMİR, Birgul GULNAR., 2018. ‘Characterization of Cryphonectria parasitica From Native Chestnut Trees in Kaz Mountain (Mount Ida)’. Journal of Agricultural Faculty of Gaziosmanpasa University http://ziraatdergi.gop.edu.tr/ JAFAG ISSN: 1300-2910 E-ISSN: 2147-8848 (2018) 35 (1), 38-45 doi:10.13002/jafag4357.
Conference presentations
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Trakya Üniversiteler Birliği III. Lisansüstü Öğrenci Kongresi, 2018-05-03 Kozma Z. Ozkılınc H., 2018.’ An Initial Analysis to Characterize Brown Rot Pathogens of Stone Fruits in Canakkale’2017.
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Monilinia fructicola from peach in Canakkale, a molecular approach to characterize the Pathogen - Hilal Ozkilinc, Zerrin Kozma
MSc. Hakan Güven
Publications
Hakan Guven, Sydney E. Everhart, Rita Milvia De Miccolis Angelini & Hilal Ozkilinc. 2021. ''Genetic diversity assessments of brown rot pathogen Monilinia fructicola based on the six simple sequence repeat loci'' Journal of Plant Diseases and Protection.
MSc. Unal Sevinc
MSc. Gözde Yıldız
gozdeyildiz@stu.comu.edu.tr
Education
08/02/2017-/07/2020 : Master of Science in Biomolecular Sciences, Graduate School of Natural and Applied Sciences, Çanakkale Onsekiz Mart University, Turkey.
05/09/2016-/2020 : Bachelor of Science in International Relations, Faculty of Economics and Political Sciences, Anadolu University, Turkey.
11/10/2014-09/12/2015 : German Language Course, RWTH Aachen University, Germany.
17/09/2009-09/07/2013 : Bachelor of Science in Molecular Biology and Genetics, Faculty of Arts and Sciences, Haliç University Istanbul, Turkey.
Conference presentations
Gozde Yildiz, Hilal Ozkilinc. The Mitochondrial Genome of the Pathogen Monilinia laxa from Peach, Presented at the 3rd Edition Applied Bioinformatics in Life Sciences, Leuven/Belgium, February 13-14, 2020
Gozde Yildiz(to appear). An Overview on Monilinia Pathogens the Causal Agent of Brown Rot Disease of Peach Considering the Pathogen Populations from Turkey. Presented at Fungal Symposium, Max Planck Institute for Evolutionary Biology, Ploen/Germany, September 2-4, 2019
Publications
H.Ozkilinc, G.Yildiz, E.Silan, K.Arslan, H.Guven, H.H.Altinok, R.Altindag, M.R.Durak. Species Diversity, Mating Types Assays and Aggressiveness Patterns of Monilinia Pathogens Causing Brown Rot of Peach Fruit in Turkey,
Projects
2017-2020 Project: 1001- Scientific and Technological Research Project Funding Program/Sensitivity of Monilinia Pathogens Causing Brown Rot of Peach Against to Respiration Inhibitor Fungicides Having Specific Mode of Action Mechanisms, Characterization of Mitochondrial Genomes and Investigating Relation Between Fungicide Resistance and Mutations on Mitochondrial Genome , Department of Molecular Biology and Genetics, Çanakkale Onsekiz Mart University, Turkey.
MSc. Ece SILAN
Education
08/02/2018- present
Master of Science in Biomolecular Sciences, Çanakkale Onsekiz Mart University, Turkey.
10/2012 - 06/2016
Bachelor of Computer Engineering, Faculty of Computer Sciences, Izmir University of Economics, İzmir, Turkey.
Projects and Thesis
2019-2021
Master Thesis: Nuclear and mitochondrial phylogenies of Monilinia brown rot pathogens from a worldwide collection.
2018-2021
Project: 1001- Scientific and Technological Research Project Funding Program No 217Z134.
MSc. Kübra ARSLAN
Education
07/2019- Present (Master of Science)
Molecular Biology and Genetics, Graduate School of Natural and Applied Sciences, Onsekiz Mart University, Çanakkale/Turkey.
09/2014 - 06/2019 (Bachelor of Science)
Department of Molecular Biology and Genetics, Faculty of Arts and Science, Onsekiz Mart University, Çanakkale/Turkey
Projects and Thesis
2018-2021
Project: 1001- Scientific and Technological Research Project Funding Program No 217Z134.
2020-2022
BAP project related to microRNA based studies.
Publications
1.Ozkilinc, H., Yildiz, G., Silan, E., Arslan, K., Guven, H., Altinok, H. H., ... & Durak, M. R. (2020). Species diversity, mating type assays, and aggressiveness patterns of Monilinia pathogens causing brown rot of peach fruit in Turkey. European Journal of Plant Pathology, 157(4), 799-814.
2. Durak, M. R., Arslan, K., Silan, E., Yildiz, G., & Ozkilinc, H. (2021). A Novel Approach for in vitro Fungicide Screening and The Sensitivity of Monilinia Populations from Peach Orchards in Turkey to Respiratory Inhibitor Fungicides. Crop Protection, 105688.
International Congress Publications and Presentations
1. Arslan K., Durak M. R., Ozkilinc H. (2019). Determination of Introns Within Mt-Genomes Of Different Phytopathogenic Fungal Species. EEBST, July 10-12, Ankara, Turkey, Page, 69. (Poster)
2. Arslan K., Durak M. R., Ozkilinc H. (2019). Mt-Genome Wide G-Quadruplex Prediction of Four Different Phytopathogenic Fungi, Fungal Symposium, September 2-4, Plön, Germany (Poster)
3. Ozkilinc H., Yildiz G., Silan E., Arslan K., Guven H., Altinok H.H., Altindag R., Durak M.R. (2019). An overview on Monilinia pathogens the causal agent of brown rot disease of peach considering the pathogen populations from Turkey. Fungal Symposium, September 2-4, Plon, Germany, Page 14 (Oral Presentation by Ozkilinc H.)
4. Silan E., Arslan K., Yildiz G., Durak M.R., Ozkilinc H. (2019). Mating Type Assays of Monilinia Pathogens in Turkey. Fungal Symposium, September 2-4, Plon, Germany, Page 15 (oral presentation by Silan E.)
MSc. Muhammed Raşit DURAK
rasitdurak@stu.edu.comu.edu.tr
Canakkale Onsekiz Mart University, Graduate School of Natural and Applied Sciences, MSc Program in Molecular Biology and Genetics, Canakkale/ Turkey
Education
08/2022 (Ph. D.)
Vienna Graduate School of Population Genetics - Vetmeduni Vienna
07/2019 - 09/2022 (Master of Science)
Molecular Biology and Genetics, Graduate School of Natural and Applied Sciences, Onsekiz Mart University, Çanakkale/Turkey.
09/2014 - 06/2019 (Bachelor of Science)
Department of Molecular Biology and Genetics, Faculty of Arts and Science, Onsekiz Mart University, Çanakkale/Turkey
Projects and Thesis
2018-2021
Project: 1001- Scientific and Technological Research Project Funding Program No 217Z134.
2020-2022
BAP Project: Related to structural genomic variations.
Publications
1. Ozkilinc, H., Yildiz, G., Silan, E., Arslan, K., Guven, H., Altinok, H. H., ... & Durak, M. R. (2020). Species diversity, mating type assays, and aggressiveness patterns of Monilinia pathogens causing brown rot of peach fruit in Turkey. European Journal of Plant Pathology, 157(4), 799-814.
2. Durak, M. R., Arslan, K., Silan, E., Yildiz, G., & Ozkilinc, H. (2021). A Novel Approach for in vitro Fungicide Screening and The Sensitivity of Monilinia Populations from Peach Orchards in Turkey to Respiratory Inhibitor Fungicides. Crop Protection, 105688.
International Congress Publications and Presentations
1. Arslan K., Durak M. R., Ozkilinc H. (2019). Determination of Introns Within Mt-Genomes Of Different Phytopathogenic Fungal Species. EEBST, July 10-12, Ankara, Turkey, Page, 69. (Poster)
2. Arslan K., Durak M. R., Ozkilinc H. (2019). Mt-Genome Wide G-Quadruplex Prediction of Four Different Phytopathogenic Fungi, Fungal Symposium, September 2-4, Plön, Germany (Poster)
3. Ozkilinc H., Yildiz G., Silan E., Arslan K., Guven H., Altinok H.H., Altindag R., Durak M.R. (2019). An overview on Monilinia pathogens the causal agent of brown rot disease of peach considering the pathogen populations from Turkey. Fungal Symposium, September 2-4, Plon, Germany, Page 14 (Oral Presentation by Ozkilinc H.)
4. Silan E., Arslan K., Yildiz G., Durak M.R., Ozkilinc H. (2019). Mating Type Assays of Monilinia Pathogens in Turkey. Fungal Symposium, September 2-4, Plon, Germany, Page 15 (oral presentation by Silan E.)